Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CAPN3P20807 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.06□□□□□ -0.16
CAPN3P20807 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.06□□□□□ -0.16
CAPN3P20807 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.06□□□□□ -0.16
CAPN3P20807 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CAPN3P20807 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.06□□□□□ -0.16
CAPN3P20807 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 BRWD1P1-201ENST00000401091 371 ntBASIC14.06□□□□□ -0.16
CAPN3P20807 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.06□□□□□ -0.16
CAPN3P20807 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.06□□□□□ -0.16
CAPN3P20807 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.06□□□□□ -0.16
CAPN3P20807 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.06□□□□□ -0.16
CAPN3P20807 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.06□□□□□ -0.16
CAPN3P20807 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.06□□□□□ -0.16
CAPN3P20807 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.06□□□□□ -0.16
CAPN3P20807 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.06□□□□□ -0.16
CAPN3P20807 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 TUBB1P2-201ENST00000422712 1306 ntBASIC14.06□□□□□ -0.16
CAPN3P20807 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 TUBB1P1-201ENST00000503144 1300 ntBASIC14.06□□□□□ -0.16
CAPN3P20807 TUBB8P4-201ENST00000511806 1324 ntBASIC14.06□□□□□ -0.16
CAPN3P20807 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.06□□□□□ -0.16
CAPN3P20807 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CAPN3P20807 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 AC068760.1-201ENST00000493579 1953 ntBASIC14.05□□□□□ -0.16
CAPN3P20807 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.05□□□□□ -0.16
CAPN3P20807 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 NUTM2HP-201ENST00000442076 2498 ntBASIC14.05□□□□□ -0.16
CAPN3P20807 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.05□□□□□ -0.16
CAPN3P20807 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
CAPN3P20807 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.05□□□□□ -0.16
CAPN3P20807 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CAPN3P20807 ACTBP8-201ENST00000403258 1108 ntBASIC14.05□□□□□ -0.16
CAPN3P20807 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.05□□□□□ -0.16
CAPN3P20807 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 ELK1P1-201ENST00000485699 580 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms