Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RAB3BP20337 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RAB3BP20337 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.8□□□□□ -0.36
RAB3BP20337 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB3BP20337 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB3BP20337 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 AC103988.2-201ENST00000561804 725 ntBASIC12.8□□□□□ -0.36
RAB3BP20337 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.8□□□□□ -0.36
RAB3BP20337 AL049840.4-201ENST00000602422 811 ntBASIC12.8□□□□□ -0.36
RAB3BP20337 AL391069.4-201ENST00000609583 481 ntBASIC12.8□□□□□ -0.36
RAB3BP20337 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 FP325330.2-201ENST00000624219 5630 ntBASIC12.8□□□□□ -0.36
RAB3BP20337 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 AC139712.1-201ENST00000378256 1875 ntBASIC12.8□□□□□ -0.36
RAB3BP20337 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RAB3BP20337 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RAB3BP20337 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB3BP20337 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB3BP20337 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RAB3BP20337 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB3BP20337 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
RAB3BP20337 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 AP002761.4-201ENST00000565433 3361 ntBASIC12.79□□□□□ -0.36
RAB3BP20337 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.79□□□□□ -0.36
RAB3BP20337 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.79□□□□□ -0.36
RAB3BP20337 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RAB3BP20337 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.79□□□□□ -0.36
RAB3BP20337 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.79□□□□□ -0.36
RAB3BP20337 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 YBX1P5-201ENST00000509441 847 ntBASIC12.79□□□□□ -0.36
RAB3BP20337 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 ZNF890P-202ENST00000530367 1156 ntBASIC12.79□□□□□ -0.36
RAB3BP20337 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.79□□□□□ -0.36
RAB3BP20337 AC069262.1-201ENST00000539058 672 ntBASIC12.79□□□□□ -0.36
RAB3BP20337 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 AC092865.5-201ENST00000545435 363 ntBASIC12.79□□□□□ -0.36
RAB3BP20337 KRT18P8-201ENST00000581937 1246 ntBASIC12.79□□□□□ -0.36
RAB3BP20337 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB3BP20337 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB3BP20337 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.79□□□□□ -0.36
RAB3BP20337 AC073592.8-201ENST00000624126 511 ntBASIC12.79□□□□□ -0.36
RAB3BP20337 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 AC087499.5-201ENST00000452760 1342 ntBASIC12.79□□□□□ -0.36
RAB3BP20337 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RAB3BP20337 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB3BP20337 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RAB3BP20337 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms