Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.71□□□□□ -0.37
CCL2P13500 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CCL2P13500 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.71□□□□□ -0.37
CCL2P13500 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.71□□□□□ -0.37
CCL2P13500 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL2P13500 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL2P13500 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL2P13500 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CCL2P13500 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL2P13500 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CCL2P13500 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CCL2P13500 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CCL2P13500 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.71□□□□□ -0.37
CCL2P13500 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 TMBIM7P-202ENST00000641474 1516 ntBASIC12.71□□□□□ -0.38
CCL2P13500 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.71□□□□□ -0.38
CCL2P13500 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.71□□□□□ -0.38
CCL2P13500 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CCL2P13500 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 AC131212.3-201ENST00000624087 4219 ntBASIC12.7□□□□□ -0.38
CCL2P13500 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.7□□□□□ -0.38
CCL2P13500 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.7□□□□□ -0.38
CCL2P13500 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL2P13500 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCL2P13500 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
CCL2P13500 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 AC009093.10-201ENST00000641956 1442 ntBASIC12.7□□□□□ -0.38
CCL2P13500 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL2P13500 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CCL2P13500 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL2P13500 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL2P13500 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CCL2P13500 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL2P13500 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CCL2P13500 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL2P13500 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCL2P13500 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 AL008718.2-201ENST00000609206 1313 ntBASIC12.69□□□□□ -0.38
CCL2P13500 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCL2P13500 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCL2P13500 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCL2P13500 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCL2P13500 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CCL2P13500 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
CCL2P13500 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCL2P13500 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCL2P13500 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCL2P13500 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCL2P13500 FAM86MP-201ENST00000340703 885 ntBASIC12.69□□□□□ -0.38
CCL2P13500 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 MIR663B-201ENST00000408361 115 ntBASIC12.69□□□□□ -0.38
CCL2P13500 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL2P13500 AL645933.1-201ENST00000440087 609 ntBASIC12.69□□□□□ -0.38
CCL2P13500 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL2P13500 AC104306.2-201ENST00000451877 341 ntBASIC12.69□□□□□ -0.38
CCL2P13500 AC108725.1-201ENST00000495472 409 ntBASIC12.69□□□□□ -0.38
CCL2P13500 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms