Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.93□□□□□ -0.5
DEFA4P12838 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.93□□□□□ -0.5
DEFA4P12838 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.93□□□□□ -0.5
DEFA4P12838 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 AC004790.1-201ENST00000612686 536 ntBASIC11.93□□□□□ -0.5
DEFA4P12838 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 AL356585.2-201ENST00000625078 2396 ntBASIC11.93□□□□□ -0.5
DEFA4P12838 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
DEFA4P12838 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
DEFA4P12838 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 AL139094.1-201ENST00000405549 1188 ntBASIC11.92□□□□□ -0.5
DEFA4P12838 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.92□□□□□ -0.5
DEFA4P12838 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 AC022447.6-201ENST00000515522 438 ntBASIC11.92□□□□□ -0.5
DEFA4P12838 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.92□□□□□ -0.5
DEFA4P12838 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.92□□□□□ -0.5
DEFA4P12838 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 AL359711.2-201ENST00000563105 872 ntBASIC11.92□□□□□ -0.5
DEFA4P12838 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.92□□□□□ -0.5
DEFA4P12838 SPDYE22P-201ENST00000582158 798 ntBASIC11.92□□□□□ -0.5
DEFA4P12838 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
DEFA4P12838 MIR8072-201ENST00000614241 80 ntBASIC11.92□□□□□ -0.5
DEFA4P12838 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.92□□□□□ -0.5
DEFA4P12838 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.92□□□□□ -0.5
DEFA4P12838 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 MEX3B-202ENST00000558133 4333 ntBASIC11.92□□□□□ -0.5
DEFA4P12838 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 KRT8P22-201ENST00000562317 1415 ntBASIC11.92□□□□□ -0.5
DEFA4P12838 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 AL354702.1-201ENST00000442006 1960 ntBASIC11.92□□□□□ -0.5
DEFA4P12838 AC016397.2-201ENST00000624848 1985 ntBASIC11.92□□□□□ -0.5
DEFA4P12838 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
DEFA4P12838 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.92□□□□□ -0.5
DEFA4P12838 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
DEFA4P12838 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
DEFA4P12838 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
DEFA4P12838 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms