Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TOP1P11387 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TOP1P11387 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TOP1P11387 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.09■□□□□ 0.33
TOP1P11387 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TOP1P11387 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TOP1P11387 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.09■□□□□ 0.33
TOP1P11387 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOP1P11387 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TOP1P11387 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TOP1P11387 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.08■□□□□ 0.33
TOP1P11387 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOP1P11387 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.08■□□□□ 0.33
TOP1P11387 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOP1P11387 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOP1P11387 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TOP1P11387 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.08■□□□□ 0.32
TOP1P11387 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.08■□□□□ 0.32
TOP1P11387 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 RN7SKP214-201ENST00000364208 315 ntBASIC17.08■□□□□ 0.32
TOP1P11387 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.08■□□□□ 0.32
TOP1P11387 SPTLC1P5-201ENST00000450718 252 ntBASIC17.08■□□□□ 0.32
TOP1P11387 RCC2P8-201ENST00000502779 1035 ntBASIC17.08■□□□□ 0.32
TOP1P11387 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.08■□□□□ 0.32
TOP1P11387 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.08■□□□□ 0.32
TOP1P11387 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.08■□□□□ 0.32
TOP1P11387 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.08■□□□□ 0.32
TOP1P11387 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.08■□□□□ 0.32
TOP1P11387 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.08■□□□□ 0.32
TOP1P11387 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.08■□□□□ 0.32
TOP1P11387 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.08■□□□□ 0.32
TOP1P11387 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TOP1P11387 RN7SL774P-201ENST00000577467 290 ntBASIC17.08■□□□□ 0.32
TOP1P11387 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.08■□□□□ 0.32
TOP1P11387 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TOP1P11387 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TOP1P11387 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TOP1P11387 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP1P11387 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TOP1P11387 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.07■□□□□ 0.32
TOP1P11387 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.07■□□□□ 0.32
TOP1P11387 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TOP1P11387 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TOP1P11387 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 MIR769-201ENST00000390225 118 ntBASIC17.07■□□□□ 0.32
TOP1P11387 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TOP1P11387 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.07■□□□□ 0.32
TOP1P11387 AC022447.6-201ENST00000515522 438 ntBASIC17.07■□□□□ 0.32
TOP1P11387 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.07■□□□□ 0.32
TOP1P11387 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.07■□□□□ 0.32
TOP1P11387 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.07■□□□□ 0.32
TOP1P11387 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.07■□□□□ 0.32
TOP1P11387 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TOP1P11387 AC091544.8-201ENST00000619490 361 ntBASIC17.07■□□□□ 0.32
TOP1P11387 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.07■□□□□ 0.32
TOP1P11387 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.07■□□□□ 0.32
TOP1P11387 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TOP1P11387 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TOP1P11387 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TOP1P11387 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TOP1P11387 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.07■□□□□ 0.32
TOP1P11387 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.07■□□□□ 0.32
TOP1P11387 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TOP1P11387 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP1P11387 AC041040.2-201ENST00000622926 2899 ntBASIC17.07■□□□□ 0.32
TOP1P11387 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.06■□□□□ 0.32
TOP1P11387 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TOP1P11387 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TOP1P11387 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms