Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL3P10147 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CCL3P10147 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL3P10147 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
CCL3P10147 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CCL3P10147 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3P10147 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3P10147 ELK2AP-201ENST00000392510 1007 ntBASIC13.18□□□□□ -0.3
CCL3P10147 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.18□□□□□ -0.3
CCL3P10147 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL3P10147 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3P10147 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL3P10147 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCL3P10147 RN7SL277P-201ENST00000481521 288 ntBASIC13.18□□□□□ -0.3
CCL3P10147 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL3P10147 RNA5SP423-201ENST00000517127 109 ntBASIC13.18□□□□□ -0.3
CCL3P10147 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CCL3P10147 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL3P10147 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL3P10147 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 AL133499.1-201ENST00000596207 608 ntBASIC13.18□□□□□ -0.3
CCL3P10147 AL022334.2-201ENST00000610000 484 ntBASIC13.18□□□□□ -0.3
CCL3P10147 MIR6769A-201ENST00000617340 73 ntBASIC13.18□□□□□ -0.3
CCL3P10147 AC015967.2-201ENST00000624092 234 ntBASIC13.18□□□□□ -0.3
CCL3P10147 AC006435.4-201ENST00000625037 234 ntBASIC13.18□□□□□ -0.3
CCL3P10147 AL356737.1-201ENST00000634391 234 ntBASIC13.18□□□□□ -0.3
CCL3P10147 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3P10147 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CCL3P10147 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CCL3P10147 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 AC139749.1-202ENST00000617529 3139 ntBASIC13.18□□□□□ -0.3
CCL3P10147 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL3P10147 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL3P10147 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL3P10147 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CCL3P10147 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CCL3P10147 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL3P10147 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL3P10147 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCL3P10147 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CCL3P10147 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL3P10147 AC097376.2-205ENST00000610159 5334 ntBASIC13.17□□□□□ -0.3
CCL3P10147 KRT8P19-201ENST00000551916 1455 ntBASIC13.17□□□□□ -0.3
CCL3P10147 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL3P10147 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL3P10147 AC012617.1-204ENST00000586340 2305 ntBASIC13.17□□□□□ -0.3
CCL3P10147 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3P10147 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3P10147 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3P10147 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CCL3P10147 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 RN7SL530P-201ENST00000485097 298 ntBASIC13.17□□□□□ -0.3
CCL3P10147 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3P10147 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL3P10147 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL3P10147 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL3P10147 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL3P10147 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3P10147 AC140658.4-201ENST00000561990 352 ntBASIC13.17□□□□□ -0.3
CCL3P10147 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL3P10147 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL3P10147 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL3P10147 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms