Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 PPY2P-201ENST00000582808 702 ntBASIC13.43□□□□□ -0.26
THBS1P07996 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 AC010327.5-201ENST00000586923 3061 ntBASIC13.43□□□□□ -0.26
THBS1P07996 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.43□□□□□ -0.26
THBS1P07996 AL136301.1-201ENST00000615830 422 ntBASIC13.43□□□□□ -0.26
THBS1P07996 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 RHOXF1P1-202ENST00000635473 501 ntBASIC13.43□□□□□ -0.26
THBS1P07996 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.43□□□□□ -0.26
THBS1P07996 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
THBS1P07996 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
THBS1P07996 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 KRT8P4-201ENST00000509735 1454 ntBASIC13.42□□□□□ -0.26
THBS1P07996 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.42□□□□□ -0.26
THBS1P07996 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 MIR326-201ENST00000362220 95 ntBASIC13.42□□□□□ -0.26
THBS1P07996 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.42□□□□□ -0.26
THBS1P07996 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.42□□□□□ -0.26
THBS1P07996 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.42□□□□□ -0.26
THBS1P07996 AC234783.1-201ENST00000441761 496 ntBASIC13.42□□□□□ -0.26
THBS1P07996 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 KRT223P-202ENST00000449164 1292 ntBASIC13.42□□□□□ -0.26
THBS1P07996 CROCCP4-201ENST00000457096 498 ntBASIC13.42□□□□□ -0.26
THBS1P07996 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.42□□□□□ -0.26
THBS1P07996 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.42□□□□□ -0.26
THBS1P07996 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.42□□□□□ -0.26
THBS1P07996 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.42□□□□□ -0.26
THBS1P07996 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.42□□□□□ -0.26
THBS1P07996 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.42□□□□□ -0.26
THBS1P07996 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.42□□□□□ -0.26
THBS1P07996 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.42□□□□□ -0.26
THBS1P07996 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
THBS1P07996 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.42□□□□□ -0.26
THBS1P07996 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.42□□□□□ -0.26
THBS1P07996 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.42□□□□□ -0.26
THBS1P07996 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
THBS1P07996 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.41□□□□□ -0.26
THBS1P07996 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
THBS1P07996 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
THBS1P07996 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
THBS1P07996 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
THBS1P07996 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms