Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.24□□□□□ -0.29
HMGN1P05114 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 AC064801.2-201ENST00000625052 1303 ntBASIC13.24□□□□□ -0.29
HMGN1P05114 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.24□□□□□ -0.29
HMGN1P05114 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HMGN1P05114 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.24□□□□□ -0.29
HMGN1P05114 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.24□□□□□ -0.29
HMGN1P05114 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 BASP1P1-201ENST00000430708 665 ntBASIC13.24□□□□□ -0.29
HMGN1P05114 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 GNAQP1-201ENST00000444815 1067 ntBASIC13.24□□□□□ -0.29
HMGN1P05114 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.24□□□□□ -0.29
HMGN1P05114 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 AP001063.1-201ENST00000568332 529 ntBASIC13.24□□□□□ -0.29
HMGN1P05114 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HMGN1P05114 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.24□□□□□ -0.29
HMGN1P05114 MIR193BHG-211ENST00000641433 5365 ntBASIC13.24□□□□□ -0.29
HMGN1P05114 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
HMGN1P05114 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HMGN1P05114 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.24□□□□□ -0.29
HMGN1P05114 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.24□□□□□ -0.29
HMGN1P05114 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.24□□□□□ -0.29
HMGN1P05114 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HMGN1P05114 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HMGN1P05114 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 AL157996.1-201ENST00000624684 2299 ntBASIC13.23□□□□□ -0.29
HMGN1P05114 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.23□□□□□ -0.29
HMGN1P05114 AC245100.3-201ENST00000441281 285 ntBASIC13.23□□□□□ -0.29
HMGN1P05114 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
HMGN1P05114 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.23□□□□□ -0.29
HMGN1P05114 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.23□□□□□ -0.29
HMGN1P05114 AP001160.2-201ENST00000596071 487 ntBASIC13.23□□□□□ -0.29
HMGN1P05114 TMEM261P1-201ENST00000604899 340 ntBASIC13.23□□□□□ -0.29
HMGN1P05114 AC005252.2-201ENST00000624630 1141 ntBASIC13.23□□□□□ -0.29
HMGN1P05114 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HMGN1P05114 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 AL590440.2-201ENST00000641973 1595 ntBASIC13.23□□□□□ -0.29
HMGN1P05114 MEX3B-202ENST00000558133 4333 ntBASIC13.23□□□□□ -0.29
HMGN1P05114 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMGN1P05114 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HMGN1P05114 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.23□□□□□ -0.29
HMGN1P05114 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HMGN1P05114 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HMGN1P05114 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGN1P05114 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
HMGN1P05114 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms