Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.25□□□□□ -0.45
CD74P04233 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CD74P04233 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CD74P04233 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD74P04233 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.24□□□□□ -0.45
CD74P04233 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.24□□□□□ -0.45
CD74P04233 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CD74P04233 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 BTBD7P1-201ENST00000447253 1453 ntBASIC12.24□□□□□ -0.45
CD74P04233 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 PDIA3P1-201ENST00000471856 1510 ntBASIC12.24□□□□□ -0.45
CD74P04233 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.24□□□□□ -0.45
CD74P04233 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.24□□□□□ -0.45
CD74P04233 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.24□□□□□ -0.45
CD74P04233 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.24□□□□□ -0.45
CD74P04233 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.24□□□□□ -0.45
CD74P04233 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.24□□□□□ -0.45
CD74P04233 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CD74P04233 AC005586.2-201ENST00000563946 837 ntBASIC12.24□□□□□ -0.45
CD74P04233 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.24□□□□□ -0.45
CD74P04233 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.24□□□□□ -0.45
CD74P04233 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.24□□□□□ -0.45
CD74P04233 AC138696.2-201ENST00000607376 223 ntBASIC12.24□□□□□ -0.45
CD74P04233 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CD74P04233 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD74P04233 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.24□□□□□ -0.45
CD74P04233 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CD74P04233 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 AL445250.1-201ENST00000641671 2259 ntBASIC12.23□□□□□ -0.45
CD74P04233 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.23□□□□□ -0.45
CD74P04233 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 700.4 ms