Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
APOA1P02647 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.03□□□□□ -0.32
APOA1P02647 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APOA1P02647 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
APOA1P02647 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOA1P02647 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
APOA1P02647 CSPG4P13-202ENST00000567704 4801 ntBASIC13.02□□□□□ -0.32
APOA1P02647 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.02□□□□□ -0.32
APOA1P02647 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.02□□□□□ -0.32
APOA1P02647 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.02□□□□□ -0.32
APOA1P02647 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
APOA1P02647 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
APOA1P02647 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.02□□□□□ -0.32
APOA1P02647 RN7SL832P-201ENST00000607781 1756 ntBASIC13.02□□□□□ -0.32
APOA1P02647 BX324167.2-201ENST00000623717 3316 ntBASIC13.02□□□□□ -0.32
APOA1P02647 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOA1P02647 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOA1P02647 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
APOA1P02647 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC13.02□□□□□ -0.33
APOA1P02647 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
APOA1P02647 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.02□□□□□ -0.33
APOA1P02647 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 AL031284.1-201ENST00000419297 478 ntBASIC13.02□□□□□ -0.33
APOA1P02647 AL353705.2-201ENST00000428243 662 ntBASIC13.02□□□□□ -0.33
APOA1P02647 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.02□□□□□ -0.33
APOA1P02647 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.02□□□□□ -0.33
APOA1P02647 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.02□□□□□ -0.33
APOA1P02647 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.02□□□□□ -0.33
APOA1P02647 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
APOA1P02647 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.02□□□□□ -0.33
APOA1P02647 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.02□□□□□ -0.33
APOA1P02647 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.02□□□□□ -0.33
APOA1P02647 LINC01225-203ENST00000563550 1244 ntBASIC13.02□□□□□ -0.33
APOA1P02647 RARRES2P9-201ENST00000565168 469 ntBASIC13.02□□□□□ -0.33
APOA1P02647 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
APOA1P02647 AC064836.3-201ENST00000607928 673 ntBASIC13.02□□□□□ -0.33
APOA1P02647 Z83851.2-201ENST00000609564 659 ntBASIC13.02□□□□□ -0.33
APOA1P02647 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
APOA1P02647 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.02□□□□□ -0.33
APOA1P02647 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
APOA1P02647 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
APOA1P02647 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
APOA1P02647 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.02□□□□□ -0.33
APOA1P02647 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
APOA1P02647 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
APOA1P02647 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.02□□□□□ -0.33
APOA1P02647 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOA1P02647 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC13.01□□□□□ -0.33
APOA1P02647 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
APOA1P02647 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.01□□□□□ -0.33
APOA1P02647 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.01□□□□□ -0.33
APOA1P02647 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.01□□□□□ -0.33
APOA1P02647 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.01□□□□□ -0.33
APOA1P02647 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 UPK3BP1-201ENST00000428678 509 ntBASIC13.01□□□□□ -0.33
APOA1P02647 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms