Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
MT-CO1P00395 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.94□□□□□ -0.02
MT-CO1P00395 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.94□□□□□ -0.02
MT-CO1P00395 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.94□□□□□ -0.02
MT-CO1P00395 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 SCARNA21-201ENST00000517026 139 ntBASIC14.94□□□□□ -0.02
MT-CO1P00395 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.94□□□□□ -0.02
MT-CO1P00395 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
MT-CO1P00395 ACTG1P17-201ENST00000558391 1119 ntBASIC14.94□□□□□ -0.02
MT-CO1P00395 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.94□□□□□ -0.02
MT-CO1P00395 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 AC008805.1-201ENST00000590892 364 ntBASIC14.94□□□□□ -0.02
MT-CO1P00395 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-CO1P00395 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.94□□□□□ -0.02
MT-CO1P00395 AL139099.5-201ENST00000635274 300 ntBASIC14.94□□□□□ -0.02
MT-CO1P00395 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.94□□□□□ -0.02
MT-CO1P00395 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
MT-CO1P00395 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.94□□□□□ -0.02
MT-CO1P00395 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.94□□□□□ -0.02
MT-CO1P00395 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-CO1P00395 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-CO1P00395 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
MT-CO1P00395 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MT-CO1P00395 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MT-CO1P00395 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MT-CO1P00395 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-CO1P00395 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MT-CO1P00395 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MT-CO1P00395 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MT-CO1P00395 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
MT-CO1P00395 EIF4HP1-201ENST00000453115 687 ntBASIC14.93□□□□□ -0.02
MT-CO1P00395 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.93□□□□□ -0.02
MT-CO1P00395 HLA-J-204ENST00000495278 958 ntBASIC14.93□□□□□ -0.02
MT-CO1P00395 SCARNA20.5-201ENST00000516991 142 ntBASIC14.93□□□□□ -0.02
MT-CO1P00395 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.93□□□□□ -0.02
MT-CO1P00395 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-CO1P00395 SNORD3B-2-202ENST00000571722 791 ntBASIC14.93□□□□□ -0.02
MT-CO1P00395 AC090164.2-201ENST00000611487 516 ntBASIC14.93□□□□□ -0.02
MT-CO1P00395 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.93□□□□□ -0.02
MT-CO1P00395 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
MT-CO1P00395 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.93□□□□□ -0.02
MT-CO1P00395 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MT-CO1P00395 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-CO1P00395 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms