Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF40O75150 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF40O75150 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF40O75150 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF40O75150 FAM86HP-204ENST00000513466 959 ntBASIC15.84■□□□□ 0.13
RNF40O75150 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF40O75150 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF40O75150 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF40O75150 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF40O75150 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF40O75150 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF40O75150 AC015910.1-201ENST00000579400 975 ntBASIC15.84■□□□□ 0.13
RNF40O75150 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF40O75150 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF40O75150 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF40O75150 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF40O75150 AL139099.5-201ENST00000635274 300 ntBASIC15.84■□□□□ 0.13
RNF40O75150 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF40O75150 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF40O75150 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF40O75150 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RNF40O75150 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF40O75150 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF40O75150 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF40O75150 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF40O75150 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF40O75150 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF40O75150 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF40O75150 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF40O75150 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RNF40O75150 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.83■□□□□ 0.12
RNF40O75150 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RNF40O75150 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.83■□□□□ 0.12
RNF40O75150 GOLGA2P4-201ENST00000441462 777 ntBASIC15.83■□□□□ 0.12
RNF40O75150 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC15.83■□□□□ 0.12
RNF40O75150 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.83■□□□□ 0.12
RNF40O75150 ZNF767P-206ENST00000513792 565 ntBASIC15.83■□□□□ 0.12
RNF40O75150 C2orf69P2-201ENST00000562032 1123 ntBASIC15.83■□□□□ 0.12
RNF40O75150 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.83■□□□□ 0.12
RNF40O75150 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC15.83■□□□□ 0.12
RNF40O75150 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.83■□□□□ 0.12
RNF40O75150 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.83■□□□□ 0.12
RNF40O75150 AL118558.3-201ENST00000607414 1079 ntBASIC15.83■□□□□ 0.12
RNF40O75150 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.83■□□□□ 0.12
RNF40O75150 AC107308.1-201ENST00000615897 301 ntBASIC15.83■□□□□ 0.12
RNF40O75150 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.83■□□□□ 0.12
RNF40O75150 AL034417.3-201ENST00000641100 1043 ntBASIC15.83■□□□□ 0.12
RNF40O75150 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RNF40O75150 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RNF40O75150 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF40O75150 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.83■□□□□ 0.12
RNF40O75150 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF40O75150 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RNF40O75150 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF40O75150 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.82■□□□□ 0.12
RNF40O75150 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF40O75150 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 AL133267.1-201ENST00000398220 340 ntBASIC15.82■□□□□ 0.12
RNF40O75150 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF40O75150 GHSR-202ENST00000427970 912 ntBASIC15.82■□□□□ 0.12
RNF40O75150 FAM197Y7-201ENST00000432892 766 ntBASIC15.82■□□□□ 0.12
RNF40O75150 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.82■□□□□ 0.12
RNF40O75150 KRT18P25-201ENST00000508931 1278 ntBASIC15.82■□□□□ 0.12
RNF40O75150 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF40O75150 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.82■□□□□ 0.12
RNF40O75150 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 AL136370.1-201ENST00000608166 691 ntBASIC15.82■□□□□ 0.12
RNF40O75150 AC138951.2-201ENST00000623455 1161 ntBASIC15.82■□□□□ 0.12
RNF40O75150 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms