Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 REXO1L6P-201ENST00000603433 1515 ntBASIC12.96□□□□□ -0.33
TRAF3IP2O43734 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAF3IP2O43734 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.96□□□□□ -0.34
TRAF3IP2O43734 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 GOLGA2P4-201ENST00000441462 777 ntBASIC12.95□□□□□ -0.34
TRAF3IP2O43734 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 AL583810.1-201ENST00000553344 1045 ntBASIC12.95□□□□□ -0.34
TRAF3IP2O43734 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 AC005730.2-201ENST00000564549 1184 ntBASIC12.95□□□□□ -0.34
TRAF3IP2O43734 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 AC009884.2-201ENST00000603110 324 ntBASIC12.95□□□□□ -0.34
TRAF3IP2O43734 AL096828.3-201ENST00000615354 462 ntBASIC12.95□□□□□ -0.34
TRAF3IP2O43734 MIR6752-201ENST00000618442 71 ntBASIC12.95□□□□□ -0.34
TRAF3IP2O43734 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAF3IP2O43734 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 TUBB8P4-201ENST00000511806 1324 ntBASIC12.94□□□□□ -0.34
TRAF3IP2O43734 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 MIR663B-201ENST00000408361 115 ntBASIC12.94□□□□□ -0.34
TRAF3IP2O43734 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AC005962.1-201ENST00000584100 773 ntBASIC12.94□□□□□ -0.34
TRAF3IP2O43734 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.94□□□□□ -0.34
TRAF3IP2O43734 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.94□□□□□ -0.34
TRAF3IP2O43734 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms