Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.69□□□□□ -0.54
UPK2O00526 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.69□□□□□ -0.54
UPK2O00526 CD8B2-202ENST00000417670 633 ntBASIC11.69□□□□□ -0.54
UPK2O00526 AC007389.4-201ENST00000454674 793 ntBASIC11.69□□□□□ -0.54
UPK2O00526 CICP12-201ENST00000455801 843 ntBASIC11.69□□□□□ -0.54
UPK2O00526 AL590640.2-201ENST00000457038 527 ntBASIC11.69□□□□□ -0.54
UPK2O00526 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.69□□□□□ -0.54
UPK2O00526 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.69□□□□□ -0.54
UPK2O00526 SLC25A47P1-201ENST00000531577 414 ntBASIC11.69□□□□□ -0.54
UPK2O00526 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.69□□□□□ -0.54
UPK2O00526 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
UPK2O00526 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.69□□□□□ -0.54
UPK2O00526 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.69□□□□□ -0.54
UPK2O00526 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.69□□□□□ -0.54
UPK2O00526 MIR4683-201ENST00000579659 81 ntBASIC11.69□□□□□ -0.54
UPK2O00526 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.69□□□□□ -0.54
UPK2O00526 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.69□□□□□ -0.54
UPK2O00526 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.69□□□□□ -0.54
UPK2O00526 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
UPK2O00526 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.69□□□□□ -0.54
UPK2O00526 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
UPK2O00526 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.69□□□□□ -0.54
UPK2O00526 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.69□□□□□ -0.54
UPK2O00526 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
UPK2O00526 AL022313.4-201ENST00000562756 2046 ntBASIC11.69□□□□□ -0.54
UPK2O00526 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
UPK2O00526 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
UPK2O00526 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.68□□□□□ -0.54
UPK2O00526 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
UPK2O00526 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.68□□□□□ -0.54
UPK2O00526 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.68□□□□□ -0.54
UPK2O00526 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
UPK2O00526 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.68□□□□□ -0.54
UPK2O00526 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.68□□□□□ -0.54
UPK2O00526 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
UPK2O00526 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 USP17L6P-201ENST00000382470 1197 ntBASIC11.68□□□□□ -0.54
UPK2O00526 AC092933.1-201ENST00000393644 945 ntBASIC11.68□□□□□ -0.54
UPK2O00526 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.68□□□□□ -0.54
UPK2O00526 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.68□□□□□ -0.54
UPK2O00526 RN7SL837P-201ENST00000463010 287 ntBASIC11.68□□□□□ -0.54
UPK2O00526 RN7SL752P-201ENST00000463779 287 ntBASIC11.68□□□□□ -0.54
UPK2O00526 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.68□□□□□ -0.54
UPK2O00526 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.68□□□□□ -0.54
UPK2O00526 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.68□□□□□ -0.54
UPK2O00526 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.68□□□□□ -0.54
UPK2O00526 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.68□□□□□ -0.54
UPK2O00526 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
UPK2O00526 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.68□□□□□ -0.54
UPK2O00526 AC015936.2-201ENST00000593177 259 ntBASIC11.68□□□□□ -0.54
UPK2O00526 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.68□□□□□ -0.54
UPK2O00526 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.68□□□□□ -0.54
UPK2O00526 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.68□□□□□ -0.54
UPK2O00526 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
UPK2O00526 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UPK2O00526 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms