Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.07□□□□□ -0.64
COLCA2A8K830 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.07□□□□□ -0.64
COLCA2A8K830 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.07□□□□□ -0.64
COLCA2A8K830 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.07□□□□□ -0.64
COLCA2A8K830 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
COLCA2A8K830 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.07□□□□□ -0.64
COLCA2A8K830 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
COLCA2A8K830 AL137784.2-201ENST00000607332 1000 ntBASIC11.07□□□□□ -0.64
COLCA2A8K830 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
COLCA2A8K830 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.07□□□□□ -0.64
COLCA2A8K830 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC11.07□□□□□ -0.64
COLCA2A8K830 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC11.07□□□□□ -0.64
COLCA2A8K830 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.07□□□□□ -0.64
COLCA2A8K830 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.07□□□□□ -0.64
COLCA2A8K830 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC11.07□□□□□ -0.64
COLCA2A8K830 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
COLCA2A8K830 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.07□□□□□ -0.64
COLCA2A8K830 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC11.07□□□□□ -0.64
COLCA2A8K830 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
COLCA2A8K830 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
COLCA2A8K830 MSTO2P-201ENST00000314835 1709 ntBASIC11.06□□□□□ -0.64
COLCA2A8K830 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.06□□□□□ -0.64
COLCA2A8K830 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 DBH-202ENST00000393056 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.06□□□□□ -0.64
COLCA2A8K830 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
COLCA2A8K830 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 FAM185BP-201ENST00000443595 716 ntBASIC11.06□□□□□ -0.64
COLCA2A8K830 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.06□□□□□ -0.64
COLCA2A8K830 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.06□□□□□ -0.64
COLCA2A8K830 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
COLCA2A8K830 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
COLCA2A8K830 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
COLCA2A8K830 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC11.05□□□□□ -0.64
COLCA2A8K830 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
COLCA2A8K830 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.05□□□□□ -0.64
COLCA2A8K830 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC11.05□□□□□ -0.64
COLCA2A8K830 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
COLCA2A8K830 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
COLCA2A8K830 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
COLCA2A8K830 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
COLCA2A8K830 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC11.05□□□□□ -0.64
COLCA2A8K830 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms