Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.15□□□□□ -0.14
C4orf47A7E2U8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.15□□□□□ -0.15
C4orf47A7E2U8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
C4orf47A7E2U8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
C4orf47A7E2U8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
C4orf47A7E2U8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 TCAF2P1-201ENST00000291129 2421 ntBASIC14.14□□□□□ -0.15
C4orf47A7E2U8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 OR51A9P-201ENST00000422578 911 ntBASIC14.14□□□□□ -0.15
C4orf47A7E2U8 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 RN7SL277P-201ENST00000481521 288 ntBASIC14.14□□□□□ -0.15
C4orf47A7E2U8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 AC010632.2-201ENST00000588369 1224 ntBASIC14.14□□□□□ -0.15
C4orf47A7E2U8 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 CICP24-201ENST00000605464 2705 ntBASIC14.14□□□□□ -0.15
C4orf47A7E2U8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 AC006372.4-201ENST00000624122 1543 ntBASIC14.14□□□□□ -0.15
C4orf47A7E2U8 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.14□□□□□ -0.15
C4orf47A7E2U8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 AC004554.1-201ENST00000422830 1468 ntBASIC14.13□□□□□ -0.15
C4orf47A7E2U8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 MIR566-201ENST00000385187 94 ntBASIC14.13□□□□□ -0.15
C4orf47A7E2U8 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 ACTG1P19-201ENST00000418987 1116 ntBASIC14.13□□□□□ -0.15
C4orf47A7E2U8 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 RN7SL23P-201ENST00000484055 275 ntBASIC14.13□□□□□ -0.15
C4orf47A7E2U8 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 RNA5SP406-201ENST00000516106 112 ntBASIC14.13□□□□□ -0.15
C4orf47A7E2U8 TREHP1-201ENST00000531328 465 ntBASIC14.13□□□□□ -0.15
C4orf47A7E2U8 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 MIR6746-201ENST00000620971 63 ntBASIC14.13□□□□□ -0.15
C4orf47A7E2U8 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.13□□□□□ -0.15
C4orf47A7E2U8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms