Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 RNU1-114P-201ENST00000365297 166 ntBASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 AC010328.2-201ENST00000597698 1111 ntBASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 AC025181.2-201ENST00000606994 802 ntBASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDX49Q9Y6V7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 CNN2P8-201ENST00000421872 913 ntBASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 RHOXF1P1-202ENST00000635473 501 ntBASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
DDX49Q9Y6V7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 ACKR1-201ENST00000368121 1240 ntBASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 MIR4741-201ENST00000579822 90 ntBASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms