Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.14■□□□□ 0.18
PTCH2Q9Y6C5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC008536.3-201ENST00000623282 1599 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC006987.1-201ENST00000413610 527 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AP000244.1-201ENST00000424582 201 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 NRADDP-201ENST00000437305 691 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC092903.1-201ENST00000466506 262 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AL353622.2-201ENST00000605846 425 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 GGNBP1-204ENST00000613113 887 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC090510.3-201ENST00000615831 821 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 LINC00528-201ENST00000600723 2160 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 AC132872.4-202ENST00000622924 2756 ntBASIC16.14■□□□□ 0.17
PTCH2Q9Y6C5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 CCL25-202ENST00000315626 450 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 SNORA57-201ENST00000383870 149 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 AL157823.1-201ENST00000403727 628 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 RHOQP2-201ENST00000449922 579 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 CES1P2-201ENST00000566467 1242 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 RN7SL602P-201ENST00000578326 324 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 RN7SL718P-201ENST00000581254 303 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 TYMSP2-201ENST00000589501 424 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 AC080013.5-201ENST00000607044 679 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 AL009176.1-201ENST00000607876 650 ntBASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCH2Q9Y6C5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms