Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 SORD2P-201ENST00000558556 1069 ntBASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 NDUFV2P1-201ENST00000596415 907 ntBASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 AL928921.2-201ENST00000641325 2442 ntBASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
COL4A3BPQ9Y5P4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AL157407.1-201ENST00000435784 904 ntBASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AC005077.2-201ENST00000449786 690 ntBASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AC022217.1-201ENST00000521069 738 ntBASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AC027237.1-201ENST00000560942 655 ntBASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AC005962.1-201ENST00000584100 773 ntBASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AC009884.2-201ENST00000603110 324 ntBASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AC090164.2-201ENST00000611487 516 ntBASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 AL136295.7-201ENST00000619226 1200 ntBASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL4A3BPQ9Y5P4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 MBLAC2-202ENST00000514906 1936 ntBASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.25■□□□□ 0.19
COL4A3BPQ9Y5P4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms