Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.21■□□□□ 0.66
NPC1L1Q9UHC9 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 KLF17P1-201ENST00000547105 1126 ntBASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 AC051619.9-201ENST00000623237 597 ntBASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPC1L1Q9UHC9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 SLC25A15P3-201ENST00000505530 290 ntBASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 RNA5SP423-201ENST00000517127 109 ntBASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 MIR3907-201ENST00000579424 151 ntBASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AL359881.3-201ENST00000602640 1721 ntBASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AL807761.2-201ENST00000422849 729 ntBASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 AL512306.1-201ENST00000432698 848 ntBASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 RPL18AP8-201ENST00000486071 528 ntBASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 TP53-221ENST00000615910 1149 ntTSL 5 BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPC1L1Q9UHC9 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC19.18■□□□□ 0.66
NPC1L1Q9UHC9 AC023794.5-201ENST00000564380 2157 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms