Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 RPL18AP8-201ENST00000486071 528 ntBASIC14.38□□□□□ -0.11
NCDNQ9UBB6 RN7SL582P-201ENST00000491078 279 ntBASIC14.38□□□□□ -0.11
NCDNQ9UBB6 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 RNA5SP406-201ENST00000516106 112 ntBASIC14.38□□□□□ -0.11
NCDNQ9UBB6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.38□□□□□ -0.11
NCDNQ9UBB6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 CICP13-201ENST00000422015 2789 ntBASIC14.37□□□□□ -0.11
NCDNQ9UBB6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.37□□□□□ -0.11
NCDNQ9UBB6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 SIGLEC22P-201ENST00000599104 714 ntBASIC14.37□□□□□ -0.11
NCDNQ9UBB6 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 AC003102.2-201ENST00000589195 1469 ntBASIC14.37□□□□□ -0.11
NCDNQ9UBB6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
NCDNQ9UBB6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms