Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 DUX4L46-201ENST00000566845 751 ntBASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 AP001002.3-201ENST00000623482 206 ntBASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 AC007191.1-201ENST00000623179 2995 ntBASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 PFN1P12-201ENST00000455938 534 ntBASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 AC100850.1-201ENST00000506768 649 ntBASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 AC009542.2-202ENST00000619004 1067 ntBASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 AC015688.4-201ENST00000580780 1647 ntBASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PARPBPQ9NWS1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 CICP20-201ENST00000443330 2801 ntBASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 AC139712.1-201ENST00000378256 1875 ntBASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms