Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AC079178.1-201ENST00000420915 656 ntBASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AC026954.1-201ENST00000429771 1293 ntBASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AC009955.4-201ENST00000597192 544 ntBASIC13.91□□□□□ -0.18
BRF2Q9HAW0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 AL008718.2-201ENST00000609206 1313 ntBASIC13.9□□□□□ -0.18
BRF2Q9HAW0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 ST13P19-201ENST00000442505 1124 ntBASIC13.9□□□□□ -0.18
BRF2Q9HAW0 GAPDHP21-201ENST00000450301 1010 ntBASIC13.9□□□□□ -0.18
BRF2Q9HAW0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 CTBP2P5-201ENST00000454986 1264 ntBASIC13.9□□□□□ -0.18
BRF2Q9HAW0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 AC100850.1-201ENST00000506768 649 ntBASIC13.9□□□□□ -0.18
BRF2Q9HAW0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 KRT17P8-201ENST00000540749 863 ntBASIC13.9□□□□□ -0.18
BRF2Q9HAW0 RBM8B-201ENST00000555532 525 ntBASIC13.9□□□□□ -0.18
BRF2Q9HAW0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 LINC02084-201ENST00000606069 1096 ntBASIC13.9□□□□□ -0.18
BRF2Q9HAW0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 AL023775.1-201ENST00000454907 1746 ntBASIC13.9□□□□□ -0.18
BRF2Q9HAW0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.9□□□□□ -0.18
BRF2Q9HAW0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
BRF2Q9HAW0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
BRF2Q9HAW0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.89□□□□□ -0.19
BRF2Q9HAW0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms