Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 USP39-220ENST00000613444 2161 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 UROS-201ENST00000368774 744 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC023141.7-201ENST00000430646 407 ntBASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL512599.1-201ENST00000430724 685 ntBASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 RNLS-203ENST00000437752 525 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 GALP-202ENST00000440823 889 ntTSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 F11R-204ENST00000537746 1245 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 BATF-202ENST00000555504 361 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC068831.5-201ENST00000557387 328 ntBASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 ANKRD26P1-203ENST00000569528 966 ntBASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL022313.4-201ENST00000562756 2046 ntBASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC007952.5-201ENST00000572818 1486 ntBASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
KRTAP4-1Q9BYQ7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 FKBP4P8-201ENST00000610931 1369 ntBASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
KRTAP4-1Q9BYQ7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms