Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AL390755.1-201ENST00000623716 2027 ntBASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 DPM3-202ENST00000368399 517 ntBASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AL008707.1-201ENST00000422498 534 ntBASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AC090164.2-201ENST00000611487 516 ntBASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AL139099.5-201ENST00000635274 300 ntBASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP3Q9BWW4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 RPL18P13-201ENST00000478088 569 ntBASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 RBM8B-201ENST00000555532 525 ntBASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 AC005962.1-201ENST00000584100 773 ntBASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 AC091544.8-201ENST00000619490 361 ntBASIC12.19□□□□□ -0.46
SSBP3Q9BWW4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms