Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF4Q9BUZ4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AC018529.2-202ENST00000611482 3087 ntBASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 FAM86HP-204ENST00000513466 959 ntBASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AC244093.1-201ENST00000610837 814 ntBASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AC067750.1-201ENST00000608826 6545 ntBASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TRAF4Q9BUZ4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 AC011700.1-201ENST00000610409 2627 ntBASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF4Q9BUZ4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms