Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
USB1Q9BQ65 CES1P1-201ENST00000421606 1704 ntBASIC13.25□□□□□ -0.29
USB1Q9BQ65 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC13.25□□□□□ -0.29
USB1Q9BQ65 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 CICP11-201ENST00000434745 2827 ntBASIC13.24□□□□□ -0.29
USB1Q9BQ65 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 RN7SL219P-201ENST00000582872 296 ntBASIC13.24□□□□□ -0.29
USB1Q9BQ65 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 AC023510.2-201ENST00000622162 746 ntBASIC13.24□□□□□ -0.29
USB1Q9BQ65 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 AC131902.2-201ENST00000566892 2172 ntBASIC13.24□□□□□ -0.29
USB1Q9BQ65 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
USB1Q9BQ65 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
USB1Q9BQ65 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 WASH3P-207ENST00000560956 1394 ntBASIC13.23□□□□□ -0.29
USB1Q9BQ65 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
USB1Q9BQ65 MIR1202-201ENST00000408529 83 ntBASIC13.23□□□□□ -0.29
USB1Q9BQ65 AC079178.1-201ENST00000420915 656 ntBASIC13.23□□□□□ -0.29
USB1Q9BQ65 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
USB1Q9BQ65 EIF3FP3-201ENST00000434851 1086 ntBASIC13.23□□□□□ -0.29
USB1Q9BQ65 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms