Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.33□□□□□ -0.12
NPAS2Q99743 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.33□□□□□ -0.12
NPAS2Q99743 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.33□□□□□ -0.12
NPAS2Q99743 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.33□□□□□ -0.12
NPAS2Q99743 AC234783.1-201ENST00000441761 496 ntBASIC14.33□□□□□ -0.12
NPAS2Q99743 BCRP2-202ENST00000447763 634 ntBASIC14.33□□□□□ -0.12
NPAS2Q99743 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.33□□□□□ -0.12
NPAS2Q99743 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 BCRP6-201ENST00000510112 632 ntBASIC14.33□□□□□ -0.12
NPAS2Q99743 BCRP7-201ENST00000511549 544 ntBASIC14.33□□□□□ -0.12
NPAS2Q99743 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.33□□□□□ -0.12
NPAS2Q99743 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.33□□□□□ -0.12
NPAS2Q99743 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.33□□□□□ -0.12
NPAS2Q99743 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.33□□□□□ -0.12
NPAS2Q99743 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.33□□□□□ -0.12
NPAS2Q99743 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.33□□□□□ -0.12
NPAS2Q99743 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.33□□□□□ -0.12
NPAS2Q99743 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NPAS2Q99743 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.33□□□□□ -0.12
NPAS2Q99743 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NPAS2Q99743 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.32□□□□□ -0.12
NPAS2Q99743 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.32□□□□□ -0.12
NPAS2Q99743 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
NPAS2Q99743 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NPAS2Q99743 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.32□□□□□ -0.12
NPAS2Q99743 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.32□□□□□ -0.12
NPAS2Q99743 PTP4A1P2-201ENST00000546033 454 ntBASIC14.32□□□□□ -0.12
NPAS2Q99743 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NPAS2Q99743 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.32□□□□□ -0.12
NPAS2Q99743 AP001063.1-201ENST00000568332 529 ntBASIC14.32□□□□□ -0.12
NPAS2Q99743 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.32□□□□□ -0.12
NPAS2Q99743 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.32□□□□□ -0.12
NPAS2Q99743 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.32□□□□□ -0.12
NPAS2Q99743 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.32□□□□□ -0.12
NPAS2Q99743 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.32□□□□□ -0.12
NPAS2Q99743 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPAS2Q99743 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 AC019294.4-201ENST00000561777 2905 ntBASIC14.32□□□□□ -0.12
NPAS2Q99743 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.32□□□□□ -0.12
NPAS2Q99743 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
NPAS2Q99743 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NPAS2Q99743 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.32□□□□□ -0.12
NPAS2Q99743 MYADML-201ENST00000474610 2147 ntBASIC14.32□□□□□ -0.12
NPAS2Q99743 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPAS2Q99743 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.31□□□□□ -0.12
NPAS2Q99743 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPAS2Q99743 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPAS2Q99743 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NPAS2Q99743 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPAS2Q99743 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPAS2Q99743 PDIA3P1-201ENST00000471856 1510 ntBASIC14.31□□□□□ -0.12
NPAS2Q99743 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.31□□□□□ -0.12
NPAS2Q99743 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPAS2Q99743 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPAS2Q99743 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.31□□□□□ -0.12
NPAS2Q99743 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPAS2Q99743 AC011498.7-201ENST00000624986 2027 ntBASIC14.31□□□□□ -0.12
NPAS2Q99743 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPAS2Q99743 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms