Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 RPL13AP25-201ENST00000484130 612 ntBASIC11.86□□□□□ -0.51
RAB40CQ96S21 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 SPDYE12P-201ENST00000618416 771 ntBASIC11.86□□□□□ -0.51
RAB40CQ96S21 AC093028.1-201ENST00000622998 982 ntBASIC11.86□□□□□ -0.51
RAB40CQ96S21 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 AC083964.2-201ENST00000623988 2396 ntBASIC11.86□□□□□ -0.51
RAB40CQ96S21 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 AC135782.3-201ENST00000562782 2105 ntBASIC11.86□□□□□ -0.51
RAB40CQ96S21 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.86□□□□□ -0.51
RAB40CQ96S21 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RAB40CQ96S21 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AL365181.3-201ENST00000605886 3222 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC009474.1-201ENST00000455096 1565 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 BEND3P3-201ENST00000611030 2440 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AL391647.1-201ENST00000395664 511 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 METTL21AP1-201ENST00000438852 635 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms