Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 AC226150.1-201ENST00000544259 466 ntBASIC15.3■□□□□ 0.04
CASD1Q96PB1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASD1Q96PB1 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.3■□□□□ 0.04
CASD1Q96PB1 AL451007.2-201ENST00000632004 563 ntBASIC15.3■□□□□ 0.04
CASD1Q96PB1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASD1Q96PB1 FGD5P1-202ENST00000614866 2498 ntBASIC15.29■□□□□ 0.04
CASD1Q96PB1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 AC232323.1-201ENST00000540724 2099 ntBASIC15.29■□□□□ 0.04
CASD1Q96PB1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 AC007952.5-201ENST00000572818 1486 ntBASIC15.29■□□□□ 0.04
CASD1Q96PB1 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 BCAS2P2-201ENST00000425064 674 ntBASIC15.29■□□□□ 0.04
CASD1Q96PB1 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 AC093909.3-201ENST00000504783 336 ntBASIC15.29■□□□□ 0.04
CASD1Q96PB1 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 KRT8P2-201ENST00000556193 944 ntBASIC15.29■□□□□ 0.04
CASD1Q96PB1 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 MIR4472-1-201ENST00000584349 80 ntBASIC15.29■□□□□ 0.04
CASD1Q96PB1 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.29■□□□□ 0.04
CASD1Q96PB1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASD1Q96PB1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 KRT8P18-201ENST00000413425 1445 ntBASIC15.28■□□□□ 0.04
CASD1Q96PB1 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CASD1Q96PB1 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASD1Q96PB1 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.28■□□□□ 0.04
CASD1Q96PB1 GRPEL2P1-201ENST00000453145 339 ntBASIC15.28■□□□□ 0.04
CASD1Q96PB1 RN7SL23P-201ENST00000484055 275 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms