Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PGBD4Q96DM1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PGBD4Q96DM1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 AC007686.3-201ENST00000619017 3487 ntBASIC15.74■□□□□ 0.11
PGBD4Q96DM1 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 RPL8P2-201ENST00000430538 502 ntBASIC15.74■□□□□ 0.11
PGBD4Q96DM1 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 FGFR3P1-201ENST00000449999 601 ntBASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 AL009178.2-201ENST00000597278 2719 ntBASIC15.74■□□□□ 0.11
PGBD4Q96DM1 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 SNX18-202ENST00000343017 3140 ntBASIC15.74■□□□□ 0.11
PGBD4Q96DM1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.74■□□□□ 0.11
PGBD4Q96DM1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 AJ011931.1-201ENST00000618749 2492 ntBASIC15.73■□□□□ 0.11
PGBD4Q96DM1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 RPSAP15-201ENST00000448168 861 ntBASIC15.73■□□□□ 0.11
PGBD4Q96DM1 DUX4L50-201ENST00000455245 715 ntBASIC15.73■□□□□ 0.11
PGBD4Q96DM1 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 AP000358.1-201ENST00000456260 156 ntBASIC15.73■□□□□ 0.11
PGBD4Q96DM1 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 AC093752.3-201ENST00000567343 901 ntBASIC15.73■□□□□ 0.11
PGBD4Q96DM1 MIR3677-201ENST00000578964 60 ntBASIC15.73■□□□□ 0.11
PGBD4Q96DM1 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.73■□□□□ 0.11
PGBD4Q96DM1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms