Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 CSPG4P11-201ENST00000560634 4910 ntBASIC12.99□□□□□ -0.33
RFT1Q96AA3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 AL512638.1-201ENST00000457493 794 ntBASIC12.98□□□□□ -0.33
RFT1Q96AA3 GAPDHP40-201ENST00000505218 1006 ntBASIC12.98□□□□□ -0.33
RFT1Q96AA3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 TPRX2P-201ENST00000535362 881 ntBASIC12.98□□□□□ -0.33
RFT1Q96AA3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 AC023310.3-201ENST00000557027 670 ntBASIC12.98□□□□□ -0.33
RFT1Q96AA3 AC100756.1-201ENST00000562736 682 ntBASIC12.98□□□□□ -0.33
RFT1Q96AA3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 AC138749.3-201ENST00000567691 622 ntBASIC12.98□□□□□ -0.33
RFT1Q96AA3 AC116165.1-201ENST00000611806 668 ntBASIC12.98□□□□□ -0.33
RFT1Q96AA3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 AL138799.1-201ENST00000448213 1675 ntBASIC12.98□□□□□ -0.33
RFT1Q96AA3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RFT1Q96AA3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RFT1Q96AA3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AL365181.3-201ENST00000605886 3222 ntBASIC12.97□□□□□ -0.33
RFT1Q96AA3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AC093525.8-201ENST00000624099 1342 ntBASIC12.97□□□□□ -0.33
RFT1Q96AA3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms