Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.84□□□□□ -0.03
KDM1BQ8NB78 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.83□□□□□ -0.03
KDM1BQ8NB78 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.83□□□□□ -0.03
KDM1BQ8NB78 KRT8P21-201ENST00000430398 1491 ntBASIC14.83□□□□□ -0.03
KDM1BQ8NB78 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
KDM1BQ8NB78 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
KDM1BQ8NB78 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.83□□□□□ -0.03
KDM1BQ8NB78 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
KDM1BQ8NB78 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
KDM1BQ8NB78 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 AC012618.1-201ENST00000461223 412 ntBASIC14.83□□□□□ -0.04
KDM1BQ8NB78 RNA5SP423-201ENST00000517127 109 ntBASIC14.83□□□□□ -0.04
KDM1BQ8NB78 POU5F1P2-201ENST00000521750 823 ntBASIC14.83□□□□□ -0.04
KDM1BQ8NB78 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 AC003686.1-201ENST00000550956 1034 ntBASIC14.83□□□□□ -0.04
KDM1BQ8NB78 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 RN7SL574P-201ENST00000581512 297 ntBASIC14.83□□□□□ -0.04
KDM1BQ8NB78 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 AL157813.1-201ENST00000612996 587 ntBASIC14.83□□□□□ -0.04
KDM1BQ8NB78 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 AL353770.1-201ENST00000614915 403 ntBASIC14.83□□□□□ -0.04
KDM1BQ8NB78 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 OR2I1P-210ENST00000642037 4691 ntBASIC14.83□□□□□ -0.04
KDM1BQ8NB78 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDM1BQ8NB78 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 AL161772.1-201ENST00000610494 4412 ntBASIC14.82□□□□□ -0.04
KDM1BQ8NB78 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 MYO15B-237ENST00000642007 4893 ntBASIC14.82□□□□□ -0.04
KDM1BQ8NB78 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 KRT18P36-201ENST00000411618 1276 ntBASIC14.82□□□□□ -0.04
KDM1BQ8NB78 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 MAGEA5-201ENST00000446757 942 ntBASIC14.82□□□□□ -0.04
KDM1BQ8NB78 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 NUP210P1-202ENST00000504322 710 ntBASIC14.82□□□□□ -0.04
KDM1BQ8NB78 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.82□□□□□ -0.04
KDM1BQ8NB78 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.82□□□□□ -0.04
KDM1BQ8NB78 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms