Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 AC152010.1-201ENST00000415779 2006 ntBASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 CYP4F23P-201ENST00000593402 1579 ntBASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 MIR1247-201ENST00000408206 136 ntBASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 GPAA1P2-201ENST00000417923 928 ntBASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 SCARNA21-201ENST00000517026 139 ntBASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 AC005586.2-201ENST00000563946 837 ntBASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 AC008805.1-201ENST00000590892 364 ntBASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 HSPA8P5-201ENST00000456928 2069 ntBASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SCUBE3Q8IX30 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AL161932.2-201ENST00000435436 679 ntBASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AC007688.1-201ENST00000475592 759 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms