Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 SORD2P-201ENST00000558556 1069 ntBASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AL596325.1-201ENST00000563991 1082 ntBASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AC138951.2-201ENST00000623455 1161 ntBASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00346Q8IVM7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 AC016694.1-201ENST00000434179 700 ntBASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 ALG3P1-201ENST00000508806 1114 ntBASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 IGHV3-72-202ENST00000621503 303 ntBASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 AC089987.1-201ENST00000551654 2209 ntBASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 TCAM1P-207ENST00000485295 1537 ntBASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00346Q8IVM7 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC00346Q8IVM7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms