Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 AL137783.1-201ENST00000623494 1896 ntBASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 TIMM8BP1-201ENST00000452384 211 ntBASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 RNA5SP416-201ENST00000516838 111 ntBASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 AC092364.2-202ENST00000597012 1073 ntBASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 AC055717.3-201ENST00000622967 595 ntBASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LYSMD2Q8IV50 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 AL928654.5-201ENST00000624831 2501 ntBASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms