Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 AC027237.1-201ENST00000560942 655 ntBASIC15.18■□□□□ 0.02
RFX6Q8HWS3 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.18■□□□□ 0.02
RFX6Q8HWS3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 KRT8P4-201ENST00000509735 1454 ntBASIC15.18■□□□□ 0.02
RFX6Q8HWS3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 KRT8P24-201ENST00000560290 1559 ntBASIC15.18■□□□□ 0.02
RFX6Q8HWS3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFX6Q8HWS3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.17■□□□□ 0.02
RFX6Q8HWS3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 KRT17P7-201ENST00000451704 1104 ntBASIC15.17■□□□□ 0.02
RFX6Q8HWS3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 MIR3197-201ENST00000582241 73 ntBASIC15.17■□□□□ 0.02
RFX6Q8HWS3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 AL358472.3-201ENST00000608147 415 ntBASIC15.17■□□□□ 0.02
RFX6Q8HWS3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 AC009093.10-201ENST00000641956 1442 ntBASIC15.17■□□□□ 0.02
RFX6Q8HWS3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.17■□□□□ 0.02
RFX6Q8HWS3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFX6Q8HWS3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms