Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRC28Q86X40 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRC28Q86X40 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LRRC28Q86X40 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRC28Q86X40 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LRRC28Q86X40 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRC28Q86X40 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
LRRC28Q86X40 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRC28Q86X40 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LRRC28Q86X40 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AC011840.2-201ENST00000563063 1520 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AC090643.2-201ENST00000623442 2029 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AL162726.2-201ENST00000438986 1017 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 RN7SL837P-201ENST00000463010 287 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 GIMAP3P-201ENST00000495150 836 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AL359711.2-201ENST00000563105 872 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AC132938.2-201ENST00000579188 680 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 IGHV3-72-202ENST00000621503 303 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AL591163.1-201ENST00000641757 987 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 BEND3P3-201ENST00000611030 2440 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 INTS4P2-202ENST00000614726 2019 ntBASIC13.03□□□□□ -0.32
LRRC28Q86X40 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRC28Q86X40 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRC28Q86X40 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRC28Q86X40 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LRRC28Q86X40 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
LRRC28Q86X40 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRC28Q86X40 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LRRC28Q86X40 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRC28Q86X40 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LRRC28Q86X40 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LRRC28Q86X40 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
LRRC28Q86X40 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRC28Q86X40 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRC28Q86X40 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
LRRC28Q86X40 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LRRC28Q86X40 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 SOCS2P1-201ENST00000417727 557 ntBASIC13.02□□□□□ -0.33
LRRC28Q86X40 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms