Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 AC015936.2-201ENST00000593177 259 ntBASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 AL358472.5-202ENST00000641448 1267 ntBASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 AC020910.5-201ENST00000623668 1865 ntBASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 RN7SKP230-201ENST00000365642 335 ntBASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 AC005229.1-201ENST00000392885 409 ntBASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 RN7SL832P-201ENST00000607781 1756 ntBASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST3H2AQ7L7L0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms