Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL136982.4-201ENST00000437689 1740 ntBASIC12.83□□□□□ -0.36
C11orf88Q6PI97 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AC087499.6-201ENST00000411576 835 ntBASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AL353779.1-201ENST00000434793 351 ntBASIC12.83□□□□□ -0.36
C11orf88Q6PI97 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 RN7SL618P-201ENST00000477850 296 ntBASIC12.83□□□□□ -0.36
C11orf88Q6PI97 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 SERBP1P5-201ENST00000510079 1181 ntBASIC12.83□□□□□ -0.36
C11orf88Q6PI97 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AL079307.3-201ENST00000556114 283 ntBASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 SPDYE22P-201ENST00000582158 798 ntBASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AC118758.2-201ENST00000614242 2813 ntBASIC12.83□□□□□ -0.36
C11orf88Q6PI97 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AC007787.1-201ENST00000588095 1583 ntBASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 MRPS18AP1-201ENST00000414458 589 ntBASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 AL662799.1-202ENST00000614205 422 ntBASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.82□□□□□ -0.36
C11orf88Q6PI97 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms