Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AL672207.1-201ENST00000328462 1570 ntBASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 PPP1R2P4-201ENST00000424051 595 ntBASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AC093826.1-201ENST00000508655 993 ntBASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 VENTXP3-201ENST00000546480 773 ntBASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 SNORD3B-1-201ENST00000577988 758 ntBASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AP003392.6-201ENST00000607709 325 ntBASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD4Q5XG99 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 AC067931.2-201ENST00000623655 2003 ntBASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 BX679664.3-201ENST00000414070 555 ntBASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 AC113935.1-201ENST00000471722 555 ntBASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 RN7SL582P-201ENST00000491078 279 ntBASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 RN7SL375P-201ENST00000492442 298 ntBASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 GOLGA2P7-209ENST00000560408 745 ntBASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LYSMD4Q5XG99 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms