Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 KRT17P7-201ENST00000451704 1104 ntBASIC14.37□□□□□ -0.11
CDKL1Q00532 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDKL1Q00532 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.37□□□□□ -0.11
CDKL1Q00532 AP000812.2-201ENST00000538934 718 ntBASIC14.37□□□□□ -0.11
CDKL1Q00532 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 AC106886.1-201ENST00000568660 600 ntBASIC14.37□□□□□ -0.11
CDKL1Q00532 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 AC073413.1-201ENST00000603927 732 ntBASIC14.37□□□□□ -0.11
CDKL1Q00532 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.37□□□□□ -0.11
CDKL1Q00532 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKL1Q00532 AC016397.2-201ENST00000624848 1985 ntBASIC14.36□□□□□ -0.11
CDKL1Q00532 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 AL354989.2-201ENST00000435838 1540 ntBASIC14.36□□□□□ -0.11
CDKL1Q00532 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKL1Q00532 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDKL1Q00532 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKL1Q00532 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.36□□□□□ -0.11
CDKL1Q00532 AL035414.1-201ENST00000451327 857 ntBASIC14.36□□□□□ -0.11
CDKL1Q00532 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDKL1Q00532 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 COX5BP1-201ENST00000507622 393 ntBASIC14.36□□□□□ -0.11
CDKL1Q00532 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKL1Q00532 AC005225.4-201ENST00000557330 545 ntBASIC14.36□□□□□ -0.11
CDKL1Q00532 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 C2orf69P2-201ENST00000562032 1123 ntBASIC14.36□□□□□ -0.11
CDKL1Q00532 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.36□□□□□ -0.11
CDKL1Q00532 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.36□□□□□ -0.11
CDKL1Q00532 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 ZACNP1-201ENST00000612259 710 ntBASIC14.36□□□□□ -0.11
CDKL1Q00532 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 RHOXF1P1-202ENST00000635473 501 ntBASIC14.36□□□□□ -0.11
CDKL1Q00532 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.36□□□□□ -0.11
CDKL1Q00532 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDKL1Q00532 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CDKL1Q00532 AC020910.6-201ENST00000623084 1459 ntBASIC14.36□□□□□ -0.11
CDKL1Q00532 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDKL1Q00532 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms