Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
IRX3P78415 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
IRX3P78415 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IRX3P78415 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
IRX3P78415 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
IRX3P78415 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
IRX3P78415 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.01■□□□□ 0.31
IRX3P78415 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
IRX3P78415 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX3P78415 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX3P78415 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.01■□□□□ 0.31
IRX3P78415 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
IRX3P78415 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX3P78415 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.01■□□□□ 0.31
IRX3P78415 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX3P78415 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 RPL7P35-201ENST00000446943 740 ntBASIC17.01■□□□□ 0.31
IRX3P78415 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.01■□□□□ 0.31
IRX3P78415 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.01■□□□□ 0.31
IRX3P78415 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX3P78415 AP002803.1-201ENST00000528836 498 ntBASIC17.01■□□□□ 0.31
IRX3P78415 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
IRX3P78415 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX3P78415 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
IRX3P78415 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.01■□□□□ 0.31
IRX3P78415 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 AC242376.2-201ENST00000619355 883 ntBASIC17.01■□□□□ 0.31
IRX3P78415 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.01■□□□□ 0.31
IRX3P78415 AC092299.1-201ENST00000632679 757 ntBASIC17.01■□□□□ 0.31
IRX3P78415 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.01■□□□□ 0.31
IRX3P78415 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
IRX3P78415 AC013726.1-201ENST00000563747 2285 ntBASIC17.01■□□□□ 0.31
IRX3P78415 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
IRX3P78415 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX3P78415 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.01■□□□□ 0.31
IRX3P78415 AC018629.1-201ENST00000623381 1736 ntBASIC17.01■□□□□ 0.31
IRX3P78415 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.01■□□□□ 0.31
IRX3P78415 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
IRX3P78415 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
IRX3P78415 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX3P78415 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 WASH3P-207ENST00000560956 1394 ntBASIC17.01■□□□□ 0.31
IRX3P78415 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX3P78415 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
IRX3P78415 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
IRX3P78415 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
IRX3P78415 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 LINC01165-201ENST00000445190 1623 ntBASIC17■□□□□ 0.31
IRX3P78415 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17■□□□□ 0.31
IRX3P78415 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17■□□□□ 0.31
IRX3P78415 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17■□□□□ 0.31
IRX3P78415 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17■□□□□ 0.31
IRX3P78415 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17■□□□□ 0.31
IRX3P78415 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 AL583805.1-201ENST00000391389 531 ntBASIC17■□□□□ 0.31
IRX3P78415 HNRNPA1P27-201ENST00000412087 955 ntBASIC17■□□□□ 0.31
IRX3P78415 AC073347.1-201ENST00000421633 2643 ntBASIC17■□□□□ 0.31
IRX3P78415 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17■□□□□ 0.31
IRX3P78415 MROH4P-201ENST00000431302 1578 ntBASIC17■□□□□ 0.31
IRX3P78415 XBP1P1-201ENST00000436573 652 ntBASIC17■□□□□ 0.31
IRX3P78415 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17■□□□□ 0.31
IRX3P78415 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17■□□□□ 0.31
IRX3P78415 AP000358.1-201ENST00000456260 156 ntBASIC17■□□□□ 0.31
IRX3P78415 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17■□□□□ 0.31
IRX3P78415 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17■□□□□ 0.31
IRX3P78415 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 PHBP15-201ENST00000574228 665 ntBASIC17■□□□□ 0.31
IRX3P78415 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IRX3P78415 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17■□□□□ 0.31
IRX3P78415 MIR3188-201ENST00000583494 85 ntBASIC17■□□□□ 0.31
IRX3P78415 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
IRX3P78415 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17■□□□□ 0.31
IRX3P78415 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms