Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
RPL39P62891 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 KRT8P35-201ENST00000483942 1338 ntBASIC10.34□□□□□ -0.75
RPL39P62891 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 AC092053.3-201ENST00000641308 4975 ntBASIC10.34□□□□□ -0.75
RPL39P62891 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.34□□□□□ -0.75
RPL39P62891 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 BRF1-202ENST00000379932 884 ntTSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC10.34□□□□□ -0.75
RPL39P62891 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC10.34□□□□□ -0.75
RPL39P62891 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
RPL39P62891 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC10.34□□□□□ -0.75
RPL39P62891 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RPL39P62891 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 TUBB8P4-201ENST00000511806 1324 ntBASIC10.33□□□□□ -0.76
RPL39P62891 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.33□□□□□ -0.76
RPL39P62891 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
RPL39P62891 AGAP12P-201ENST00000585227 2359 ntBASIC10.33□□□□□ -0.76
RPL39P62891 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.33□□□□□ -0.76
RPL39P62891 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
RPL39P62891 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 TLE1P1-201ENST00000422965 589 ntBASIC10.33□□□□□ -0.76
RPL39P62891 NUS1P3-201ENST00000423502 862 ntBASIC10.33□□□□□ -0.76
RPL39P62891 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 FDX1P1-201ENST00000449115 551 ntBASIC10.33□□□□□ -0.76
RPL39P62891 AC026410.3-201ENST00000514280 936 ntBASIC10.33□□□□□ -0.76
RPL39P62891 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC10.33□□□□□ -0.76
RPL39P62891 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.33□□□□□ -0.76
RPL39P62891 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 KRT18P58-201ENST00000527480 1120 ntBASIC10.33□□□□□ -0.76
RPL39P62891 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC10.33□□□□□ -0.76
RPL39P62891 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.33□□□□□ -0.76
RPL39P62891 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.33□□□□□ -0.76
RPL39P62891 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
RPL39P62891 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms