Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
TMEM258P61165 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
TMEM258P61165 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
TMEM258P61165 FAR1-201ENST00000354817 5264 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM258P61165 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
TMEM258P61165 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
TMEM258P61165 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
TMEM258P61165 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
TMEM258P61165 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC8.35□□□□□ -1.07
TMEM258P61165 HIF3A-205ENST00000377670 5852 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 ARHGEF34P-201ENST00000483587 4532 ntBASIC8.35□□□□□ -1.07
TMEM258P61165 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
TMEM258P61165 SH3BGRL2-201ENST00000369838 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 Z95114.4-201ENST00000623420 3578 ntBASIC8.35□□□□□ -1.07
TMEM258P61165 TBX19-201ENST00000367821 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM258P61165 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC8.34□□□□□ -1.07
TMEM258P61165 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TMEM258P61165 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 AC006372.3-201ENST00000444158 4049 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 PKD1L2-205ENST00000527937 4165 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 KLC2-202ENST00000394065 3755 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 TRERF1-203ENST00000372917 3914 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM258P61165 APOBEC3C-201ENST00000361441 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 FHOD3-202ENST00000359247 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 DSG4-202ENST00000359747 4526 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 Telomerase-vert.1-201ENST00000363312 438 ntBASIC8.34□□□□□ -1.07
TMEM258P61165 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC8.34□□□□□ -1.07
TMEM258P61165 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 AL022318.4-201ENST00000381568 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 SSR4P1-201ENST00000415143 412 ntBASIC8.34□□□□□ -1.07
TMEM258P61165 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC8.34□□□□□ -1.07
TMEM258P61165 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM258P61165 AC012414.1-201ENST00000556676 535 ntBASIC8.34□□□□□ -1.07
TMEM258P61165 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 AL121829.2-201ENST00000620908 328 ntBASIC8.34□□□□□ -1.07
TMEM258P61165 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
TMEM258P61165 LINC02069-201ENST00000457449 2591 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 SEMA4A-202ENST00000368282 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC8.34□□□□□ -1.07
TMEM258P61165 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TMEM258P61165 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM258P61165 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 KIRREL3-201ENST00000525144 3808 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 EPS15L1-203ENST00000535753 2666 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM258P61165 MPP4-201ENST00000315506 2330 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
TMEM258P61165 MPP4-207ENST00000428900 2320 ntTSL 2 BASIC8.34□□□□□ -1.08
TMEM258P61165 STAT6-205ENST00000543873 3119 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
TMEM258P61165 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
TMEM258P61165 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
TMEM258P61165 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
TMEM258P61165 SLC27A6-202ENST00000395266 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM258P61165 HS1BP3-202ENST00000402541 4358 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM258P61165 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM258P61165 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM258P61165 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
TMEM258P61165 RGS7BP-201ENST00000334025 4160 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM258P61165 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC8.33□□□□□ -1.08
TMEM258P61165 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC8.33□□□□□ -1.08
TMEM258P61165 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM258P61165 SEC14L1-212ENST00000585618 2712 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM258P61165 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TMEM258P61165 PHC1-201ENST00000433083 5033 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms