Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN20P56880 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
CLDN20P56880 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CLDN20P56880 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN20P56880 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CLDN20P56880 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN20P56880 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN20P56880 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.41□□□□□ -0.26
CLDN20P56880 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN20P56880 GOLGA2P4-201ENST00000441462 777 ntBASIC13.41□□□□□ -0.26
CLDN20P56880 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 AC092658.1-201ENST00000505836 891 ntBASIC13.41□□□□□ -0.26
CLDN20P56880 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN20P56880 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN20P56880 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN20P56880 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN20P56880 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN20P56880 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
CLDN20P56880 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN20P56880 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.41□□□□□ -0.26
CLDN20P56880 AC002472.3-201ENST00000640124 621 ntBASIC13.41□□□□□ -0.26
CLDN20P56880 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN20P56880 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CLDN20P56880 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLDN20P56880 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDN20P56880 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CLDN20P56880 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 AC015909.5-201ENST00000624336 2266 ntBASIC13.41□□□□□ -0.26
CLDN20P56880 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDN20P56880 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDN20P56880 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 AC015818.8-201ENST00000587907 1519 ntBASIC13.4□□□□□ -0.26
CLDN20P56880 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 AC018442.1-201ENST00000421439 2061 ntBASIC13.4□□□□□ -0.26
CLDN20P56880 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDN20P56880 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 FAM86MP-201ENST00000340703 885 ntBASIC13.4□□□□□ -0.26
CLDN20P56880 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CLDN20P56880 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 ACTBP11-201ENST00000436287 1126 ntBASIC13.4□□□□□ -0.26
CLDN20P56880 MTX1P1-201ENST00000440904 838 ntBASIC13.4□□□□□ -0.26
CLDN20P56880 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 RPSAP36-202ENST00000494591 1261 ntBASIC13.4□□□□□ -0.26
CLDN20P56880 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDN20P56880 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 RN7SL219P-201ENST00000582872 296 ntBASIC13.4□□□□□ -0.26
CLDN20P56880 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms