Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
EPHB4P54760 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.4■□□□□ 0.22
EPHB4P54760 AC012362.1-201ENST00000434906 739 ntBASIC16.4■□□□□ 0.22
EPHB4P54760 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.4■□□□□ 0.22
EPHB4P54760 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 AC010234.1-201ENST00000494599 870 ntBASIC16.4■□□□□ 0.22
EPHB4P54760 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.4■□□□□ 0.22
EPHB4P54760 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.4■□□□□ 0.22
EPHB4P54760 RPL17P45-201ENST00000586289 509 ntBASIC16.4■□□□□ 0.22
EPHB4P54760 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.4■□□□□ 0.22
EPHB4P54760 AL109837.1-201ENST00000603272 613 ntBASIC16.4■□□□□ 0.22
EPHB4P54760 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.4■□□□□ 0.22
EPHB4P54760 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.4■□□□□ 0.22
EPHB4P54760 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.4■□□□□ 0.22
EPHB4P54760 BX640514.1-201ENST00000583223 1918 ntBASIC16.4■□□□□ 0.22
EPHB4P54760 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.4■□□□□ 0.22
EPHB4P54760 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
EPHB4P54760 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.4■□□□□ 0.22
EPHB4P54760 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
EPHB4P54760 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
EPHB4P54760 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.39■□□□□ 0.22
EPHB4P54760 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
EPHB4P54760 SBF1P1-201ENST00000444527 5631 ntBASIC16.39■□□□□ 0.22
EPHB4P54760 FAM90A7P-201ENST00000382628 1395 ntBASIC16.39■□□□□ 0.21
EPHB4P54760 FAM90A23P-201ENST00000400136 1395 ntBASIC16.39■□□□□ 0.21
EPHB4P54760 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
EPHB4P54760 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHB4P54760 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
EPHB4P54760 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHB4P54760 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.39■□□□□ 0.21
EPHB4P54760 AC079112.1-201ENST00000454972 939 ntBASIC16.39■□□□□ 0.21
EPHB4P54760 SCARNA21-201ENST00000517026 139 ntBASIC16.39■□□□□ 0.21
EPHB4P54760 POU5F1P2-201ENST00000521750 823 ntBASIC16.39■□□□□ 0.21
EPHB4P54760 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHB4P54760 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.39■□□□□ 0.21
EPHB4P54760 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHB4P54760 MEG3_2.1-201ENST00000611456 105 ntBASIC16.39■□□□□ 0.21
EPHB4P54760 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.39■□□□□ 0.21
EPHB4P54760 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.39■□□□□ 0.21
EPHB4P54760 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.39■□□□□ 0.21
EPHB4P54760 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.39■□□□□ 0.21
EPHB4P54760 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
EPHB4P54760 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.38■□□□□ 0.21
EPHB4P54760 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHB4P54760 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.38■□□□□ 0.21
EPHB4P54760 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.38■□□□□ 0.21
EPHB4P54760 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
EPHB4P54760 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
EPHB4P54760 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHB4P54760 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHB4P54760 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHB4P54760 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 AC239868.1-201ENST00000369385 493 ntBASIC16.38■□□□□ 0.21
EPHB4P54760 AL512430.1-201ENST00000392575 860 ntBASIC16.38■□□□□ 0.21
EPHB4P54760 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.38■□□□□ 0.21
EPHB4P54760 AC010141.1-201ENST00000411585 623 ntBASIC16.38■□□□□ 0.21
EPHB4P54760 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.38■□□□□ 0.21
EPHB4P54760 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.38■□□□□ 0.21
EPHB4P54760 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.38■□□□□ 0.21
EPHB4P54760 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.38■□□□□ 0.21
EPHB4P54760 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
EPHB4P54760 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.38■□□□□ 0.21
EPHB4P54760 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.38■□□□□ 0.21
EPHB4P54760 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
EPHB4P54760 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.38■□□□□ 0.21
EPHB4P54760 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms