Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LIMK1P53667 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LIMK1P53667 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LIMK1P53667 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LIMK1P53667 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.32□□□□□ -0.12
LIMK1P53667 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.32□□□□□ -0.12
LIMK1P53667 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.32□□□□□ -0.12
LIMK1P53667 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LIMK1P53667 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.32□□□□□ -0.12
LIMK1P53667 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.31□□□□□ -0.12
LIMK1P53667 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
LIMK1P53667 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.31□□□□□ -0.12
LIMK1P53667 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.31□□□□□ -0.12
LIMK1P53667 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIMK1P53667 TLE1P1-201ENST00000422965 589 ntBASIC14.31□□□□□ -0.12
LIMK1P53667 AL512306.1-201ENST00000432698 848 ntBASIC14.31□□□□□ -0.12
LIMK1P53667 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 AC093909.3-201ENST00000504783 336 ntBASIC14.31□□□□□ -0.12
LIMK1P53667 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.31□□□□□ -0.12
LIMK1P53667 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.31□□□□□ -0.12
LIMK1P53667 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LIMK1P53667 AC140113.1-201ENST00000603467 169 ntBASIC14.31□□□□□ -0.12
LIMK1P53667 AC006548.2-201ENST00000605217 529 ntBASIC14.31□□□□□ -0.12
LIMK1P53667 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIMK1P53667 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIMK1P53667 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIMK1P53667 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIMK1P53667 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIMK1P53667 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIMK1P53667 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LIMK1P53667 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LIMK1P53667 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.31□□□□□ -0.12
LIMK1P53667 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.31□□□□□ -0.12
LIMK1P53667 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMK1P53667 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 AC018629.1-201ENST00000623381 1736 ntBASIC14.3□□□□□ -0.12
LIMK1P53667 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
LIMK1P53667 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LIMK1P53667 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LIMK1P53667 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.3□□□□□ -0.12
LIMK1P53667 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LIMK1P53667 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LIMK1P53667 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.3□□□□□ -0.12
LIMK1P53667 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.3□□□□□ -0.12
LIMK1P53667 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.3□□□□□ -0.12
LIMK1P53667 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.3□□□□□ -0.12
LIMK1P53667 FTLP5-201ENST00000586853 534 ntBASIC14.3□□□□□ -0.12
LIMK1P53667 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.3□□□□□ -0.12
LIMK1P53667 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.3□□□□□ -0.12
LIMK1P53667 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.3□□□□□ -0.12
LIMK1P53667 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMK1P53667 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms