Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC6A12P48065 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SLC6A12P48065 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC6A12P48065 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC6A12P48065 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC6A12P48065 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 OR8S1-201ENST00000310194 1080 ntBASIC13.98□□□□□ -0.17
SLC6A12P48065 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SLC6A12P48065 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 VDAC1P1-201ENST00000439229 848 ntBASIC13.98□□□□□ -0.17
SLC6A12P48065 GOLGA2P4-201ENST00000441462 777 ntBASIC13.98□□□□□ -0.17
SLC6A12P48065 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC6A12P48065 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC6A12P48065 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 PGAM1P5-201ENST00000548011 764 ntBASIC13.98□□□□□ -0.17
SLC6A12P48065 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.98□□□□□ -0.17
SLC6A12P48065 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.98□□□□□ -0.17
SLC6A12P48065 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 RN7SL560P-201ENST00000577943 264 ntBASIC13.98□□□□□ -0.17
SLC6A12P48065 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 AL096828.3-201ENST00000615354 462 ntBASIC13.98□□□□□ -0.17
SLC6A12P48065 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SLC6A12P48065 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SLC6A12P48065 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SLC6A12P48065 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SLC6A12P48065 AGAP10P-201ENST00000454844 2418 ntBASIC13.98□□□□□ -0.17
SLC6A12P48065 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC6A12P48065 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 KRT8P29-201ENST00000420409 1371 ntBASIC13.97□□□□□ -0.17
SLC6A12P48065 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SLC6A12P48065 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.97□□□□□ -0.17
SLC6A12P48065 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
SLC6A12P48065 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SLC6A12P48065 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 GK-202ENST00000378941 458 ntTSL 3 BASIC13.97□□□□□ -0.17
SLC6A12P48065 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.97□□□□□ -0.17
SLC6A12P48065 OR2R1P-201ENST00000441404 914 ntBASIC13.97□□□□□ -0.17
SLC6A12P48065 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SLC6A12P48065 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 RPL13AP20-201ENST00000459725 609 ntBASIC13.97□□□□□ -0.17
SLC6A12P48065 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.97□□□□□ -0.17
SLC6A12P48065 RPL18P13-201ENST00000478088 569 ntBASIC13.97□□□□□ -0.17
SLC6A12P48065 SCARNA21-201ENST00000517026 139 ntBASIC13.97□□□□□ -0.17
SLC6A12P48065 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.97□□□□□ -0.17
SLC6A12P48065 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC6A12P48065 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.97□□□□□ -0.17
SLC6A12P48065 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC6A12P48065 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms