Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.02■□□□□ 0.32
NEDD4P46934 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NEDD4P46934 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 ISCA2P1-201ENST00000425548 448 ntBASIC17.02■□□□□ 0.32
NEDD4P46934 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.02■□□□□ 0.32
NEDD4P46934 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.02■□□□□ 0.32
NEDD4P46934 AC091544.8-201ENST00000619490 361 ntBASIC17.02■□□□□ 0.32
NEDD4P46934 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NEDD4P46934 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.02■□□□□ 0.32
NEDD4P46934 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NEDD4P46934 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
NEDD4P46934 TUBB8P4-201ENST00000511806 1324 ntBASIC17.02■□□□□ 0.32
NEDD4P46934 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEDD4P46934 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEDD4P46934 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.02■□□□□ 0.31
NEDD4P46934 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEDD4P46934 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.02■□□□□ 0.31
NEDD4P46934 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.02■□□□□ 0.31
NEDD4P46934 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.02■□□□□ 0.31
NEDD4P46934 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEDD4P46934 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NEDD4P46934 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NEDD4P46934 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.02■□□□□ 0.31
NEDD4P46934 CCT8L1P-201ENST00000465400 1674 ntBASIC17.02■□□□□ 0.31
NEDD4P46934 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.02■□□□□ 0.31
NEDD4P46934 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NEDD4P46934 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.01■□□□□ 0.31
NEDD4P46934 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 RNA5SP359-201ENST00000364838 113 ntBASIC17.01■□□□□ 0.31
NEDD4P46934 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NEDD4P46934 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.01■□□□□ 0.31
NEDD4P46934 TSPY25P-201ENST00000429463 745 ntBASIC17.01■□□□□ 0.31
NEDD4P46934 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 AC022494.1-201ENST00000466044 728 ntBASIC17.01■□□□□ 0.31
NEDD4P46934 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 AC103810.3-201ENST00000583567 96 ntBASIC17.01■□□□□ 0.31
NEDD4P46934 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NEDD4P46934 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NEDD4P46934 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 AL157791.1-201ENST00000553667 1699 ntBASIC17.01■□□□□ 0.31
NEDD4P46934 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEDD4P46934 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NEDD4P46934 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NEDD4P46934 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17■□□□□ 0.31
NEDD4P46934 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17■□□□□ 0.31
NEDD4P46934 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17■□□□□ 0.31
NEDD4P46934 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17■□□□□ 0.31
NEDD4P46934 RN7SL11P-201ENST00000471305 293 ntBASIC17■□□□□ 0.31
NEDD4P46934 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17■□□□□ 0.31
NEDD4P46934 RN7SL277P-201ENST00000481521 288 ntBASIC17■□□□□ 0.31
NEDD4P46934 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17■□□□□ 0.31
NEDD4P46934 CD164-210ENST00000512821 964 ntTSL 2 BASIC17■□□□□ 0.31
NEDD4P46934 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17■□□□□ 0.31
NEDD4P46934 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17■□□□□ 0.31
NEDD4P46934 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEDD4P46934 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17■□□□□ 0.31
NEDD4P46934 AL591471.1-201ENST00000621855 229 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms